The detailed information of tRNA gene sequence


Sequence ID>WENV170765229
Genome IDLWDU01035948
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 4171
End posion on genome 4260
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
accgcattcc
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGCTGAAACCAGCTCCCTGCTAAGGAGCCATACGGGAAACTGTA
TCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
tattagaaaa
Secondary structure (Cloverleaf model)
>WENV170765229	Ser	GCT
                   c      GCCA tattagaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G C G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CATACGGGAAACTGTATC
                    G - C
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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