The detailed information of tRNA gene sequence


Sequence ID>WENV170765252
Genome IDLWDU01036185
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 24270
End posion on genome 24342
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgtggcttgg
tRNA gene sequence 
ACGGACGTAGCTCAATTGGCAGAGCAGCGGATTCCAAATCCGCAGGTTGGGGGTTCAAGT
CCCTCCGTCCGTGttt
Downstream region at tRNA end position 
ctgctcaatt
Secondary structure (Cloverleaf model)
>WENV170765252	Trp	CCA
                   g      Gttt ctgctcaatt
                     A - T
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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