The detailed information of tRNA gene sequence


Sequence ID>WENV170765256
Genome IDLWDU01036223
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 5430
End posion on genome 5337
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttgactatag
tRNA gene sequence 
GGAAGAGTTTGCTGGTCTGGTGACCGCCACGGTCTTCAAAACCGTTGAGTGGTGTTAACG
CATCACTGGTGGGTTCGATTCCCATCCTCTTCCGttt
Downstream region at tRNA end position 
ttcatgcgcc
Secondary structure (Cloverleaf model)
>WENV170765256	SeC(p)	TCA
                   g      Gttt ttcatgcgcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     T   C          T T
                    T     T A C C C     A
      C T G        T      + | | | |     G
    T       G T C G       G T G G G     C
    G       |   | |                 T T
    G       C C G C
      T G A        C     TGAGTGGTGTTAACGCATCACTG
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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