The detailed information of tRNA gene sequence


Sequence ID>WENV170765259
Genome IDLWDU01036283
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 7964
End posion on genome 8051
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atagacgcct
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGCCGATTGTGCAACACTGGAAATGTTGTGTCCGGGTAACTGGA
CCGGGGGTTCGAATCCCCCTCTCTCCGCtt
Downstream region at tRNA end position 
aatctgaatg
Secondary structure (Cloverleaf model)
>WENV170765259	Ser	GGA
                   t      GCtt aatctgaatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G       + | | +                 T T
    C       T T G T
      C G A        G     TGTCCGGGTAACTGGACC
                    C - G
                    A - T
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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