The detailed information of tRNA gene sequence


Sequence ID>WENV170765294
Genome IDLWDU01037102
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 44976
End posion on genome 45067
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcgttgttct
tRNA gene sequence 
GGAGAGATGGCCGAGCTCGGTTGAAGGCGTCTGACTCGAAATCAGATGTGGGGGTAACTC
CACCGGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
agtgaacaag
Secondary structure (Cloverleaf model)
>WENV170765294	Ser	CGA
                   t      GCCA agtgaacaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | + | | |     G
  C         G C C G       G G G G G     C
  G           | | |                 T T
  G         A G G C
    T T G A        G     TGTGGGGGTAACTCCACC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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