The detailed information of tRNA gene sequence


Sequence ID>WENV170765295
Genome IDLWDU01037102
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 45118
End posion on genome 45210
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ataaattttt
tRNA gene sequence 
GGAGAGATGTCCGAGCGGTTGAAGGAGCACGACTGGAAATCGTGTAGGCGGTCACAAGCT
GTCTCGGGGGTTCAAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
cccggaaaat
Secondary structure (Cloverleaf model)
>WENV170765295	Ser	GGA
                   t      GCCA cccggaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G G G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TAGGCGGTCACAAGCTGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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