The detailed information of tRNA gene sequence


Sequence ID>WENV170765334
Genome IDLWDU01037136
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 274
End posion on genome 351
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cttgccaaat
tRNA gene sequence 
AGGCCAGTAGCTCCAATTGGTTAGAGCGGCGGTCTCCAAAACCGCTTGTTGGGGGTTCGA
GTCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
aaaacagaag
Secondary structure (Cloverleaf model)
>WENV170765334	Trp	CCA
                   t      GCCA aaaacagaag
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
    T A A C        A      | + | | |     G
  T         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     TTGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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