The detailed information of tRNA gene sequence


Sequence ID>WENV170765339
Genome IDLWDU01037161
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 17302
End posion on genome 17390
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgcgacatgc
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCAGCTCCCTGCTAAGGAGCCATACCTGGTAACGGG
TATCGAGGGTTCGAATCCCTCCGTCTCGCggg
Downstream region at tRNA end position 
cgggacatac
Secondary structure (Cloverleaf model)
>WENV170765339	Ser	GCT
                   c      Cggg cgggacatac
                     G   G
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CATACCTGGTAACGGGTATC
                    G - C
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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