The detailed information of tRNA gene sequence


Sequence ID>WENV170765353
Genome IDLWDU01037228
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 10280
End posion on genome 10204
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnntcggt
tRNA gene sequence 
CGGGGAGTGGCGCAGCCTGGTAGCGCACTTGTTTTGGGTACAAGGGGTCGCTGGTTCGAA
TCCAGTCTCCCCGACCA
Downstream region at tRNA end position 
gtatttcgta
Secondary structure (Cloverleaf model)
>WENV170765353	Pro	TGG
                   t      ACCA gtatttcgta
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G A C C     A
      C G A        G      + | | | |     G
    C       C G C G       G C T G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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