The detailed information of tRNA gene sequence


Sequence ID>WENV170765370
Genome IDLWDU01037343
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 285586
End posion on genome 285662
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgtggctgg
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCTGGCCGCTCATAACGGCTAGGTCGCGGGTTCGAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
tgcccggcgc
Secondary structure (Cloverleaf model)
>WENV170765370	Met	CAT
                   g      ACCA tgcccggcgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTC
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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