The detailed information of tRNA gene sequence


Sequence ID>WENV170765384
Genome IDLWDU01037345
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 11601
End posion on genome 11511
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagcggcagg
tRNA gene sequence 
GGAGCAGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATACGGTAACCCCGT
ATCGAGGGTTCGAATCCCTCCTGCTCCGCCA
Downstream region at tRNA end position 
cctcctagat
Secondary structure (Cloverleaf model)
>WENV170765384	Ser	GGA
                   g      GCCA cctcctagat
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGGTAACCCCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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