The detailed information of tRNA gene sequence


Sequence ID>WENV170765403
Genome IDLWDU01037354
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 28389
End posion on genome 28479
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgcgagatgc
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCAGCTCCCTGCTAAGGAGCCATACCTGGTAACGGG
TATCGAGGGTTCGAATCCCTCCGTCTCTCCAa
Downstream region at tRNA end position 
tcctttccaa
Secondary structure (Cloverleaf model)
>WENV170765403	Ser	GCT
                   c      CCAa tcctttccaa
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CATACCTGGTAACGGGTATC
                    G - C
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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