The detailed information of tRNA gene sequence


Sequence ID>WENV170765436
Genome IDLWDU01037532
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1038
End posion on genome 1113
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cttcgcctga
tRNA gene sequence 
GCGGGTATAGCTCAGCTGGTAGAGCGGCGGTCTCCAAAACCGCAGGTCCTGGGTTCAAGT
CCTAGTGCCCGTGCCA
Downstream region at tRNA end position 
ggcggatttc
Secondary structure (Cloverleaf model)
>WENV170765436	Trp	CCA
                   a      GCCA ggcggatttc
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     G A T C C     A
      C G A        A      | | + | |     A
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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