The detailed information of tRNA gene sequence


Sequence ID>WENV170765438
Genome IDLWDU01037542
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 13424
End posion on genome 13335
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caatctggtt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCGCCCCTGCTAAGGGCGTATACGTTTACGCGTA
TCGAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
gccagtcttc
Secondary structure (Cloverleaf model)
>WENV170765438	Ser	GCT
                   t      GCCA gccagtcttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGTTTACGCGTATC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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