The detailed information of tRNA gene sequence


Sequence ID>WENV170765453
Genome IDLWDU01037578
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 126193
End posion on genome 126104
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tgaacaatac
tRNA gene sequence 
GGAGAGGTGTCTGAGCGGCTGAAGGAGCGCGCTTGGAAAGCGCGTGTGTGGGCAACTGCA
CCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tttcaccccg
Secondary structure (Cloverleaf model)
>WENV170765453	Pro	TGG
                   c      GCCA tttcaccccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T C T       G A G G G     C
    G         + | |                 T T
    C       A G G A
      T G A        G     TGTGTGGGCAACTGCACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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