The detailed information of tRNA gene sequence


Sequence ID>WENV170765457
Genome IDLWDU01037583
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 9058
End posion on genome 9155
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgccccaagt
tRNA gene sequence 
GGGAGTGGATCGGAGCTGGTGTTCCGCCCGGCCTTCAAAGCCGGTTGGGTTGCGTGAACA
GCGTGACCGGTGGGTTCGATTCCCATGCACTCCCGCCA
Downstream region at tRNA end position 
tcttgttcat
Secondary structure (Cloverleaf model)
>WENV170765457	SeC	TCA
                   t      GCCA tcttgttcat
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      T C G        T      + | | | |     G
    G       A G G C       G T G G G     C
    G       | | | |                 T T
    T       T C C G
      G T          C     TTGGGTTGCGTGAACAGCGTGACCG
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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