The detailed information of tRNA gene sequence


Sequence ID>WENV170765510
Genome IDLWDU01037681
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 5462
End posion on genome 5386
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaactatttc
tRNA gene sequence 
GGGCCTATAGCTCAACTGGTTAGAGCAGCGGACTCATAATCCGTTGGTTCCAGGTTCAAG
TCCTGGTGGGCCCACCA
Downstream region at tRNA end position 
tctctccttc
Secondary structure (Cloverleaf model)
>WENV170765510	Met	CAT
                   c      ACCA tctctccttc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G T C C     A
      C A A        A      | | | | |     A
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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