The detailed information of tRNA gene sequence


Sequence ID>WENV170765528
Genome IDLWDU01037742
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 14014
End posion on genome 13925
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cggcccccac
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGCTGAAACCACCGCTTTGCTAAAGCGGCGTGCCCTTCACGGGG
TACCGGGGGTTCGAATCCCCCCCTCTCCGCag
Downstream region at tRNA end position 
cgccccgccg
Secondary structure (Cloverleaf model)
>WENV170765528	Ser	GCT
                   c      GCag cgccccgccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTGCCCTTCACGGGGTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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