The detailed information of tRNA gene sequence


Sequence ID>WENV170765529
Genome IDLWDU01037750
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 9211
End posion on genome 9299
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cttccaaccc
tRNA gene sequence 
GGAGAGGTGCCCGAGTGGCTGAAGGGGCGCGCCTGGAAAGCGCGTGTGCCGGTTTCCGGT
ACCGAGGGTTCGAATCCCTCTCTCTCCGCtt
Downstream region at tRNA end position 
cccgacgctg
Secondary structure (Cloverleaf model)
>WENV170765529	Ser	GGA
                   c      GCtt cccgacgctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TGTGCCGGTTTCCGGTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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