The detailed information of tRNA gene sequence


Sequence ID>WENV170765533
Genome IDLWDU01037758
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 17717
End posion on genome 17642
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggtcccatct
tRNA gene sequence 
ACCGGCGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGTAGGTTCGAGT
CCTGCCGCCGGTGCCA
Downstream region at tRNA end position 
cgcggatgtt
Secondary structure (Cloverleaf model)
>WENV170765533	Trp	CCA
                   t      GCCA cgcggatgtt
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | + | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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