The detailed information of tRNA gene sequence


Sequence ID>WENV170765542
Genome IDLWDU01037845
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 3568
End posion on genome 3481
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcttggccgc
tRNA gene sequence 
GGAGAGATGCCGGAGTGGTCGAACGGGCCGGTCTCGAAAACCGGAGTGCCCTTTTGGGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGCtg
Downstream region at tRNA end position 
cgctcgcctc
Secondary structure (Cloverleaf model)
>WENV170765542	Ser	CGA
                   c      GCtg cgctcgcctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G A G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     AGTGCCCTTTTGGGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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