The detailed information of tRNA gene sequence


Sequence ID>WENV170765548
Genome IDLWDU01037937
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 5638
End posion on genome 5725
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgccccactc
tRNA gene sequence 
GGAGGGGTGGCAGAGCGGTCGAATGCGTCGGTCTTGAAAACCGAAGTGCCCTCCGGGGCA
CCGGGGGTTCGAATCCCTCCCCCTCCGCtc
Downstream region at tRNA end position 
ccgcccatgg
Secondary structure (Cloverleaf model)
>WENV170765548	Ser	TGA
                   c      GCtc ccgcccatgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     AGTGCCCTCCGGGGCACC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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