The detailed information of tRNA gene sequence


Sequence ID>WENV170765559
Genome IDLWDU01038008
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2563
End posion on genome 2489
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gaataagcat
tRNA gene sequence 
GGCCCTGTAGCGCAGTTGGTTAGCGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCAAG
TCCCGTCAGGGTCGCtc
Downstream region at tRNA end position 
cgaaagcgac
Secondary structure (Cloverleaf model)
>WENV170765559	Asp	GTC
                   t      GCtc cgaaagcgac
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C G C G       G C G G G     C
    G       | | | +                 T T
    G       G C G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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