The detailed information of tRNA gene sequence


Sequence ID>WENV170765562
Genome IDLWDU01038017
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 596
End posion on genome 509
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggcgtcctcg
tRNA gene sequence 
GGAGGGTTGTCCGAGCGGCCGATGGACCTGGTCTTGAAAACCAGTGGGCAGCAATGTCCC
GTGGGTTCGAATCCCACACCCTCCGCCA
Downstream region at tRNA end position 
tcggaagagg
Secondary structure (Cloverleaf model)
>WENV170765562	Ser	TGA
                   g      GCCA tcggaagagg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G       + | | |                 T T
    C       T G G A
      C G A        C     TGGGCAGCAATGTCCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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