The detailed information of tRNA gene sequence


Sequence ID>WENV170765588
Genome IDLWDU01038271
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 6013
End posion on genome 5937
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gccccttgtc
tRNA gene sequence 
GGGGGTGTAGCTCAATCGGTTAGAGCGCCTGCCTGTCACGCAGGAGGTTGCGAGTTCAAG
TCTCGTCACTCCCGCCA
Downstream region at tRNA end position 
ttttcttttt
Secondary structure (Cloverleaf model)
>WENV170765588	Asp	GTC
                   c      GCCA ttttcttttt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C T C     A
      T A A        A      + | | | |     A
    C       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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