The detailed information of tRNA gene sequence


Sequence ID>WENV170765609
Genome IDLWDU01038541
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 6656
End posion on genome 6732
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tccgcccacc
tRNA gene sequence 
GGCAGAGTAGCTCAGTTGGTTAGAGCGGCGGAATCATAATCCGCATGTCGGGGGTTCGAG
TCCCTCCTCTGCTACCA
Downstream region at tRNA end position 
tttcccccat
Secondary structure (Cloverleaf model)
>WENV170765609	Met	CAT
                   c      ACCA tttcccccat
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     ATGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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