The detailed information of tRNA gene sequence


Sequence ID>WENV170765611
Genome IDLWDU01038583
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 4732
End posion on genome 4637
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aaatttttcc
tRNA gene sequence 
cGGAGAGTGAAGGGTGCCTGGTGGTCCCCGCGGTCTTCAAAACCGTTGTCGGTTCGTGAA
CGGGCCGAGGTAGGTTCGATTCCTACCCTCTCCGCCAt
Downstream region at tRNA end position 
ttttattttt
Secondary structure (Cloverleaf model)
>WENV170765611	SeC(p)	TCA
                   c      CCAt ttttattttt
                     c - G
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T   C          T T
                    G     C A T C C     A
    C C G T        A      | | | | |     G
  T         G G G A       G T A G G     C
  G         + | |                   T T
  G         T C C C
    T G G          C     TGTCGGTTCGTGAACGGGCCGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK