The detailed information of tRNA gene sequence


Sequence ID>WENV170765656
Genome IDLWDU01038733
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 9950
End posion on genome 9873
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cgggaaacaa
tRNA gene sequence 
GCATCGGTGCCCGAGCGGCCCAAGGGAACGGTCTGCAAAGCCGTAAAGTCGCGGGTTCAA
ATCCCGCCCGGTGCTCCA
Downstream region at tRNA end position 
taatctgggc
Secondary structure (Cloverleaf model)
>WENV170765656	Cys	GCA
                   a      TCCA taatctgggc
                     G - C
                     C - G
                     A - T
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    G       G C C C       G C G G G     C
    G         | | |                 T T
    C       A G G G
      C C A        A     AAAGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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