The detailed information of tRNA gene sequence


Sequence ID>WENV170765665
Genome IDLWDU01038915
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 8598
End posion on genome 8511
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgtcccccgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCGCCCCTGCTAAGGGTGTAACGGGAAACCGTTC
GAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ggtacgtcaa
Secondary structure (Cloverleaf model)
>WENV170765665	Ser	GCT
                   c      GCCA ggtacgtcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TAACGGGAAACCGTTC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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