The detailed information of tRNA gene sequence


Sequence ID>WENV170765681
Genome IDLWDU01038937
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 54252
End posion on genome 54350
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agtcgaacat
tRNA gene sequence 
GGCGGGGTTTCCGCGGCTGGTGCCCGGCCTCGACTTCAAATCGAGTGTGGAGCGTGTCGC
CACGTTCCAGGCGGGTTCGATTCCCGTCCCCCGCCGCCA
Downstream region at tRNA end position 
tttctcgctc
Secondary structure (Cloverleaf model)
>WENV170765681	SeC	TCA
                   t      GCCA tttctcgctc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T   C          T T
                    T     T G C C C     A
      C G G        T      + | | | |     G
    T       C G C C       G C G G G     C
    G         | | |                 T T
    G       C C G G
      T G C        C     TGTGGAGCGTGTCGCCACGTTCCAG
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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