The detailed information of tRNA gene sequence


Sequence ID>WENV170765708
Genome IDLWDU01039114
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 40130
End posion on genome 40206
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgaagaccgg
tRNA gene sequence 
GGCGGTGTAGCTCAGTCGGTTAGAGCGGCGGCTTCATAAGCCGTAGGTCGGTGGTTCAAG
TCCACTCACCGCTACCA
Downstream region at tRNA end position 
gtctttggat
Secondary structure (Cloverleaf model)
>WENV170765708	Met	CAT
                   g      ACCA gtctttggat
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T C A C C     A
      T G A        A      + | | | |     A
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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