The detailed information of tRNA gene sequence


Sequence ID>WENV170765727
Genome IDLWDU01039182
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 6761
End posion on genome 6848
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgcccccgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCGCCCCTGCTAAGGGTGTAACGGGCAACCGTTC
GAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gcgacctcgc
Secondary structure (Cloverleaf model)
>WENV170765727	Ser	GCT
                   c      GCCA gcgacctcgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TAACGGGCAACCGTTC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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