The detailed information of tRNA gene sequence


Sequence ID>WENV170765738
Genome IDLWDU01039223
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 179300
End posion on genome 179389
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acagtacaaa
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCTGAAGGAGCACGCTTGGAAAGCGTGTAAGTCGGCAACGGCT
TCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
tcttcagcgc
Secondary structure (Cloverleaf model)
>WENV170765738	Ser	GGA
                   a      GCCA tcttcagcgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TAAGTCGGCAACGGCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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