The detailed information of tRNA gene sequence


Sequence ID>WENV170765760
Genome IDLWDU01039228
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 169794
End posion on genome 169719
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cccttcaagc
tRNA gene sequence 
GGGCGATTAACTCAATTGGTAGAGTGCCATGTTCACAGCGTGGAGGTTACTGGTTCAAGT
CCAGTATCGCCCACCA
Downstream region at tRNA end position 
gccgcccctg
Secondary structure (Cloverleaf model)
>WENV170765760	Val	CAC
                   c      ACCA gccgcccctg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T G A C C     A
      T A A        A      | | | | |     A
    T       C T C A       A C T G G     C
    G       | | | |                 T T
    G       G A G T
      T A          G     AGGTT
                    C - G
                    C - G
                    A - T
                    T + G
                    G - C
                  T       G
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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