The detailed information of tRNA gene sequence


Sequence ID>WENV170765765
Genome IDLWDU01039230
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 38179
End posion on genome 38103
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgcttcgaa
tRNA gene sequence 
GGGCCCTTAGCTCAGTTGGTTAGAGCAGGTGACTCATAATCGCTTGGTCGTAGGTTCGAG
TCCTACAGGGCCCACCA
Downstream region at tRNA end position 
ttttttcctc
Secondary structure (Cloverleaf model)
>WENV170765765	Met	CAT
                   a      ACCA ttttttcctc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    G - C
                    T + G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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