The detailed information of tRNA gene sequence


Sequence ID>WENV170765775
Genome IDLWDU01039254
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 7246
End posion on genome 7173
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tctattatac
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGTCAGAGCATCGGAATCATAATCCGAGTGTCCGGGGTTCGAG
TCCCTGCGCCGCTAttt
Downstream region at tRNA end position 
tcaacggcct
Secondary structure (Cloverleaf model)
>WENV170765775	Met	CAT
                   c      Attt tcaacggcct
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GTGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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