The detailed information of tRNA gene sequence


Sequence ID>WENV170765799
Genome IDLWDU01039415
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 43705
End posion on genome 43794
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcgcgcgcgc
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGCTGAAAGCGCGCCCCTGCTAAGGGTGTATAGGTTTACTCCTA
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttcataaagg
Secondary structure (Cloverleaf model)
>WENV170765799	Ser	GCT
                   c      GCCA ttcataaagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    C       A A G C
      T G A        G     TATAGGTTTACTCCTATC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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