The detailed information of tRNA gene sequence


Sequence ID>WENV170765804
Genome IDLWDU01039421
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 9898
End posion on genome 9800
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gcaatttcat
tRNA gene sequence 
GGAAGCGTTTCTGCGGCTGGTGCCCGGCCCGGACTTCAAATCCGGTGGGGGGCGTGGCGA
CACGTCCCCGGCGGGTTCGATTCCCGTCCGCTTCCGCCA
Downstream region at tRNA end position 
tttataagac
Secondary structure (Cloverleaf model)
>WENV170765804	SeC(p)	TCA
                   t      GCCA tttataagac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    T     T G C C C     A
      C G G        T      + | | | |     G
    T       C G T C       G C G G G     C
    G         | + |                 T T
    G       C C G G
      T G C        C     TGGGGGGCGTGGCGACACGTCCCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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