The detailed information of tRNA gene sequence


Sequence ID>WENV170765882
Genome IDLWDU01039574
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 9525
End posion on genome 9434
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaatagtcac
tRNA gene sequence 
GGAGAGATGACCGAGTGGCCGAAGGTGGCAGCCTGCTAAGCTGTTGTATGGGGTAACCTG
TACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tattttatga
Secondary structure (Cloverleaf model)
>WENV170765882	Ser	GCT
                   c      GCCA tattttatga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTATGGGGTAACCTGTACC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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