The detailed information of tRNA gene sequence


Sequence ID>WENV170765901
Genome IDLWDU01039854
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 181
End posion on genome 105
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
actggctttt
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGTTAGAGCAGTGGAATCATAATCCAAAGGTCGTGGGTTCAAA
TCCCTCCACCGCTACCA
Downstream region at tRNA end position 
tttatttagt
Secondary structure (Cloverleaf model)
>WENV170765901	Met	CAT
                   t      ACCA tttatttagt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        A      |   | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    G   A
                    T - A
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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