The detailed information of tRNA gene sequence


Sequence ID>WENV170765907
Genome IDLWDU01039947
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 29519
End posion on genome 29430
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtctaattgc
tRNA gene sequence 
GGAAAGGTGACCGAGTGGCCGAAGGTGCGTGACTGGAAATCACGTGTACGGGCAACCGTA
CCGAGGGTTCGAATCCCTCCCTTTCCGCCA
Downstream region at tRNA end position 
gcaacccatc
Secondary structure (Cloverleaf model)
>WENV170765907	Ser	GGA
                   c      GCCA gcaacccatc
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTACGGGCAACCGTACC
                    C - G
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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