The detailed information of tRNA gene sequence


Sequence ID>WENV170765908
Genome IDLWDU01039961
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1972
End posion on genome 2046
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cctcagtttt
tRNA gene sequence 
GGGCTCGTAGCTCAGTGGGAGAGCGCCTGCCTCACACGCAGGAAGTCGCTGGTTCGAACC
CAGCCGGGCCCACCA
Downstream region at tRNA end position 
cgcaaatcac
Secondary structure (Cloverleaf model)
>WENV170765908	Val	CAC
                   t      ACCA cgcaaatcac
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          C A
                    T     C G A C C     A
        G A        A      | | | | |     G
      T     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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