The detailed information of tRNA gene sequence


Sequence ID>WENV170765909
Genome IDLWDU01039961
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 801
End posion on genome 703
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ctcaattccc
tRNA gene sequence 
GGAGGTGGATGCGTCACTGGTGGGCGCCCCGGTCTTCAAAACCGTGCGTGCGGCACTAAT
CCTGTCGCAGGTGGGTTCGATTCCCACACACTTCCGCCA
Downstream region at tRNA end position 
ggtcatttaa
Secondary structure (Cloverleaf model)
>WENV170765909	SeC(p)	TCA
                   c      GCCA ggtcatttaa
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     T - A
                     G - C
                     G   A          T T
                    A     C A C C C     A
      C A C        T      | | | | |     G
    T       T G C G       G T G G G     C
    G       + | | |                 T T
    G       G C G C
      T G G        C     GCGTGCGGCACTAATCCTGTCGCAG
                    C   T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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