The detailed information of tRNA gene sequence


Sequence ID>WENV170765914
Genome IDLWDU01039965
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 54426
End posion on genome 54502
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atccccttgc
tRNA gene sequence 
GGGGTCGTAGTTCAGTTGGTTAGAACGTTGGCCTGTCACGCCAAAGGCCGCGGGTTCGAG
TCCCGTCGACCCCGCCA
Downstream region at tRNA end position 
ccgtactcgg
Secondary structure (Cloverleaf model)
>WENV170765914	Asp	GTC
                   c      GCCA ccgtactcgg
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGCC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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