The detailed information of tRNA gene sequence


Sequence ID>WENV170765937
Genome IDLWDU01040090
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 5315
End posion on genome 5404
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tccccgccgc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTCGAAGGCGGTAGACTCGAAATCTATTGTGGCGGCAACGTCA
CCGGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ccaaattaaa
Secondary structure (Cloverleaf model)
>WENV170765937	Ser	CGA
                   c      GCCA ccaaattaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGTGGCGGCAACGTCACC
                    G + T
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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