The detailed information of tRNA gene sequence


Sequence ID>WENV170765939
Genome IDLWDU01040103
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 3671
End posion on genome 3579
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgccctttgc
tRNA gene sequence 
GGAGGAGTGGGTGAGCGGCTGAAACCACCTCATTGCTAATGAGGCGTATGCGCAAAACGT
GTACCGAGGGTTCGAATCCCTCCTCCTCCGCCA
Downstream region at tRNA end position 
gaggtctcct
Secondary structure (Cloverleaf model)
>WENV170765939	Ser	GCT
                   c      GCCA gaggtctcct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTATGCGCAAAACGTGTACC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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