The detailed information of tRNA gene sequence


Sequence ID>WENV170765948
Genome IDLWDU01040117
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 17420
End posion on genome 17331
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctaccatgct
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGCCGAACGGGCACGACTGGAAATCGTGTAGGGGCGCAAGCTTC
TCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gaaattttcc
Secondary structure (Cloverleaf model)
>WENV170765948	Ser	GGA
                   t      GCCA gaaattttcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G C G G G     C
    G         | | |                 T T
    C       A C G G
      C G A        G     TAGGGGCGCAAGCTTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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