The detailed information of tRNA gene sequence


Sequence ID>WENV170765950
Genome IDLWDU01040119
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 4767
End posion on genome 4692
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtttttttgt
tRNA gene sequence 
GGCCCGGTGGTGTAGCGGTTAACATATCGGCCTGTCACGCCGAAGATCGTGGGTTCGAAT
CCCATCCGGGTCGCCA
Downstream region at tRNA end position 
ttcctcagtc
Secondary structure (Cloverleaf model)
>WENV170765950	Asp	GTC
                   t      GCCA ttcctcagtc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T A C C C     A
      C G A        G      + | | | |     G
    G       T G T G       G T G G G     C
    G       | | | +                 T T
    T       A C A T
      T A          A     AGATC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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