The detailed information of tRNA gene sequence


Sequence ID>WENV170765952
Genome IDLWDU01040120
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 67445
End posion on genome 67356
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attcaccctc
tRNA gene sequence 
GGAGAGATGGCTGAGTGGACGAAAGCGCCGGTCTCGAAAACCGGTATGGGGGCAACCTCA
TCGTGGGTTCAAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
cattcagaca
Secondary structure (Cloverleaf model)
>WENV170765952	Ser	CGA
                   c      GCCA cattcagaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G T C G       G T G G G     C
    G         | | |                 T T
    A       A A G C
      C G A        G     TATGGGGGCAACCTCATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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