The detailed information of tRNA gene sequence


Sequence ID>WENV170766010
Genome IDLWDU01040318
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 10066
End posion on genome 10161
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gtcagcgtgg
tRNA gene sequence 
GGAGAGGGATCGGGCCCGGTGGCCCGGCCGGTCTTCAAAACCGTGATGTCGGCCTTTACG
GTCGATGGAGGGTTCGACTCCCTCCCTTCTCCGCCA
Downstream region at tRNA end position 
gcagcacttt
Secondary structure (Cloverleaf model)
>WENV170766010	SeC(p)	TCA
                   g      GCCA gcagcacttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C
                     G - C          T C
                    A     C T C C C     A
      C C C        T      | | | | |     G
    G       G G G C       G A G G G     C
    G       | | | |                 T T
    T       C C C G
      G G          G     GATGTCGGCCTTTACGGTCGATG
                    C   T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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